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Home » newsletter » Page 4

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The Geography of Ecology

November 16, 2018 by wpeeb

What’s the difference? How is it that a pest or pathogen can kill its host in one place but not another? Research Assistant Professor Christy Leppanen wants to know.

Leppanen is looking for differences that explain why an invasive insect, the hemlock woolly adelgid (Adelges tsugae or HWA), kills North American eastern hemlocks (Tsuga canadensis) and Carolina hemlocks (T. caroliniana), but not hemlocks from its native range in Asia.

Christy Leppanen“Simply speaking, I am interested in identifying mechanisms responsible for different outcomes when communities are considered the same,” Leppanen says. “For example, a particular insect pest or biocontrol agent kills its host plant in one location, but not another. We increase the likelihood of success and reduce the risk of negative non-target effects when management takes these mechanisms into account.”

Easier said than done. Including these considerations seems intuitive, but discerning differences in communities is challenging. Populations are influenced by direct and indirect interactions, such as with predators, competitors, pathogens, and microbial communities, or host resistance, all influenced by variation in nutrients, phenology, and climate.

“Difficulty transferring population control mechanisms from one location to another might reflect the fact that differences in these systems might not be inconsequential.”

For instance, in eastern North America, hemlock woolly adelgid (HWA) biocontrol using natural enemies translocated from HWA’s native range has not yet proven successful. HWA infests different hemlock species in its native range. Evidence suggests host resistance influences infestations, and while this does not preclude some role of natural enemies, vulnerability in eastern North American hemlocks might override possible population level control by natural enemies.

Leppanen comes from a multidisciplinary research, management, and regulatory background in environmental toxicology, conservation biology, and pest management. Her work with HWA falls within her larger interests to improve pest control, mitigate associated harmful non-target effects, and increase sustainable practices.

“The HWA problem embodies many challenges we face managing nature,” Leppanen says. “We have not confirmed which mechanisms control HWA populations in its native range, but specificity associated with effective biocontrol means its interactions and role in population control must be precisely understood. We sometimes feel pressured, however, to implement before we understand. Additionally, approaches sometimes counter one another; for example, chemical control that is often broad spectrum can have broad non-target impacts, even to natural enemies.”

Leppanen is confident scientists will find solutions.

“Collectively, we’ll keep at it. This is interesting and important work, with new tools and technologies and an enthusiastic and engaged group of participants.”

At UT, Leppanen teaches courses in environmental toxicology and invasion biology, the latter with Professor Daniel Simberloff. She is also the author of an award-winning mock scientific journal. The Bulletin of ZOMBIE Research (BOZR) is a collection of deadpan post-apocalyptic articles that uses popular culture to lure readers into learning about research and technical literature, dissolving barriers to accessing and understanding science.


Illustration by Steven Lee (graphiko.com)

Filed Under: faculty, newsletter

A Rare Collection of Fish Specimens

November 16, 2018 by wpeeb

The UT Etnier Ichthyology Collection (UTEIC) was established in 1965 when Professor David A. Etnier started collecting fish specimens from throughout the state for teaching and research purposes. At the time, little was known about fish diversity in the region, which made identification challenging. The need for a collection became apparent to Etnier, so he began sampling fishes from the many river systems in Tennessee. The UTEIC now holds approximately 425,000 specimens, a staggering number for a young collection, gathered from nearly all 50 states, Gulf of Mexico, Mexico, South America, Africa, Australia, New Zealand, Antarctica, Russia, and the Atlantic and Pacific oceans.

ichthyology specimensWith more than 40,000 jars of specimens, it is the largest fish collection in the state of Tennessee and one of the most valuable in the southeastern United States. It has become a highly celebrated, nationally renowned biological archive. In fact, many southeastern US specimens in the collection have prompted the discovery of new species and have been used to study the effects of climate change and water quality on aquatic communities. The UTEIC is considered the most comprehensive tool enabling researchers to identify and predict changes in where fishes live and the size of their populations throughout Tennessee.

While UTEIC contains collections from all over the world, the bulk of its holdings come from east of the Rocky Mountains in North America, most notably from biological hotspots in the Southeastern region. Over the years, the UTEIC has served as a critical repository, possessing substantial inventories, such as samples from regional monitoring surveys spanning more than 50 years provided by the Tennessee Valley Authority and the Tennessee Wildlife Resources Agency. Among these holdings is a significant representation of southeastern jeopardized species.

The collection has also served as an invaluable resource for researchers, private agencies, and governmental organizations. The loan program processes hundreds of outgoing fish and tissue biopsies for DNA extraction each year. Requests for data associated with the specimens are constant. Since its establishment, the studies of at least 45 PhD and MSc students incorporated existing data or produced new data from the collection. Fish specimens used in more than 100 publications embodying the research of Etnier and his students are vouchered in the UTEIC, including 269 lots (2,995 specimens) of designated paratypes. The UTEIC is an invaluable resource for teaching purposes, providing specimens for classes in both ichthyology and vertebrate biology. Additionally, undergraduate students complete independent research projects using UTEIC specimens and data from the collection.

Benjamin Keck with studentNatural history collections such as the UTEIC are becoming increasingly important as researchers become more interested in how organisms are related, interact with each other, and respond to largely human-caused and relatively rapid changes in global environments. In these areas, the UTEIC is very much an active and growing collection. Our current curator, Benjamin Keck, has described new species, including the Tennessee Logperch (Percina apina). He works with other EEB faculty to examine how land use patterns are associated with fish communities and serves on advisory committees for US Fish and Wildlife Service reviews of endangered species, including the famous snail darter (Percina tanasi).

UTEIC’s new and vibrant online presence expands contribution to knowledge about aquatic resources. Researchers at other institutions and government agencies can quickly access the data, request loans, predict occurrences for survey work, and generally increase the number of studies possible. In the future, staff would also like to develop teaching modules for a broad range of educators based on the data. For instance, a community ecology lesson could allow students to pick a local creek or river, use UTEIC data to determine which species occur there, and then explore the ecology of the individual species to predict community interactions.

Several years ago, Professor Etnier created the Etnier Ichthyology Collection Endowment. The endowment provides financial resources to help maintain and improve the collection. The endowment pays for the bulk of the supplies necessary for maintenance and collaboration efforts (alcohol, glassware, shipping materials, and fees). The ultimate goal, however, is to increase the endowment to the level necessary to support the growth of EEB outreach programs, facilitate critical storage improvements and, eventually, endow the UTEIC curator position.

Alumni and friends who support the endowment will help ensure the viability of this valuable collection. For more information about the Collection and the Endowment, contact Jennifer Brummett at 865-974-1948 or email her at jparris@utk.edu.

Filed Under: fish, newsletter

Student Research Thrives Thanks to Herbarium

November 16, 2018 by wpeeb

Doing work in the HerbariumOver the past two years, the UT Herbarium has proudly supported student botanical research through awards from the L. R. Hesler Fund and the Breedlove, Dennis Fund. More than $15,000 from these two funds has supported six undergraduate and 10 graduate students. Student research projects have included using species distribution modeling to detect dispersal limitation in endemic species, evaluating post-fire fungal associations, examining seed dispersal via ants, and determining how predacious crab spiders affect plant-pollinator interactions.

Thank you to the donors to these endowments who make ongoing student research possible in the Department of Ecology and Evolutionary Biology!

Filed Under: herbarium, newsletter

Natural History of the Great Smoky Mountains

November 16, 2018 by wpeeb

Want to take a field course immersed in the natural beauty and ecological complexity of one the world’s biodiversity hotspots?

Sepcimens in test tubesThe Great Smoky Mountains National Park is a UNESCO World Heritage Site, an International Biosphere Reserve, a Biodiversity Hotspot, and a naturalist’s paradise. The Smokies also are at our own backdoor. Since 2016, EEB has offered a field course, EEB 480: Natural History of the Great Smoky Mountains, that allows students to explore the plant and animal communities, geology, geography, and human history of our nation’s most visited national park. Over a two-week period in the summer mini-term, students immerse themselves in the natural history of our Southern Appalachians.

The first week is taught on campus, where students dig into the outstanding biodiversity collections maintained by EEB and the McClung Museum, learn about plant and animal communities in the Smokies, and identify species in these communities. Students also learn about the human history and ecological threats to the Smokies, including invasive species, changing environmental conditions, and human impacts.

The second week is devoted to field-based exploration of the Great Smoky Mountains. Students and faculty stay at the EEB Field Station, just outside of the Greenbrier entrance to the Great Smoky Mountains National Park. They live and work in a community environment, staying in an open-air camping area with modern kitchen and bathroom facilities. They get up early, stay up late, get wet and dirty, and eat well. Fieldwork involves a lot of hiking. Each day they explore a different part of the park, investigating plant and animal communities and identifying species in the wild. The course winds up with students each making presentations on a research topic that they choose while immersed in the natural wonders of the Park.

Students exploring ecology in the Great Smoky Mountains

Filed Under: field course, Great Smoky Mountains NP, newsletter, summer, teaching

Fall 2017 EEB Newsletter Now Available!

November 6, 2017 by wpeeb

The Fall 2017 issue of Explorations, the EEB Newsletter, is now available!  You can view the newsletter as a printable pdf.

Filed Under: MAIN, newsletter

Fire Sparks Life

November 6, 2017 by wpeeb

fungiIn late November of 2016, a single spark started a fire on a mountain in the Great Smoky Mountains National Park (GSMNP) that quickly became one of the largest natural disasters in the history of Tennessee. When it was finally over, the wildfires burned close to 18,000 acres in and around the Park, destroyed over 2,400 buildings, and claimed 14 lives. They were the most deadly and destructive wildfires in the Southeastern United States in 2016.

For faculty in the Department of Ecology and Evolutionary Biology, the fires sparked unique opportunities for ecological research and discovery from fungi and soil microbes to plant communities and invasive ecology.

Fungi play two roles in the environment. They decompose organic matter and return nutrients to the soil. Fungi also have a symbiotic relationship with plants and provide them with essential minerals and water in exchange for sugar.

“Fungi are an understated, but essential part of the environment,” says Professor Karen Hughes, who is working with colleague Brandon Matheny and a team from the University of Illinois to understand why a completely new group of rapidly growing “fire-response” fungi are appearing.

Fires are rare in the Smokies, since 1934 when the National Park Service established the GSMNP, mainly due to a change in perception of fire and its role in ecosystem health. The high-intensity fires that raged through the Smokies destroyed most fungi in the fire zones, which gives Hughes and her team an opportunity to study new “fire-response” fungi which appear after the fires and if they are different from those in the Western United States where fires are more common.

“We are identifying fire-response fungi that may be ‘new to science’ and documenting other fungi that are enhanced rather than destroyed by fire,” Hughes says. “The health and recovery of the forest depends on fungi being restored to the soil. The normal processes of decomposition and symbiosis must be re-established if forests are to recover.”

students holding fungiThe soil these fungi grow in is the focus of Jen Schweitzer’s research in the Smokies. With exploratory funding from the UT Office of Research, Schweitzer, an associate professor in EEB, Hughes, and other researchers from UT’s Department of Civil and Environmental Engineering are examining soil properties and processes in sites ranging from non-burned areas to areas with low-, medium-, and high-intensity burns.

“Our research is focused on the dual impacts, together and in isolation, of the effects of fire and urbanization on soils, soil microbial communities, and soil-plant interactions,” Schweitzer says.

Fire and urbanization are two widespread disturbances that are increasing due to climate change and the growing number of people living in cities. Researchers, however, rarely have a chance to examine their effects together. The proximity of Gatlinburg to the Smokies provides Schweitzer and her team a unique opportunity to study the impacts. Most of what researchers understand about fire is based on studies in the arid Western United States, but the results will most likely differ from studies in the mesic areas of the Southeastern United States.

“An additional opportunity with these sites in the urban-wildland fire gradient is to examine the independent and combined roles of fire and urbanization as selective forces on plant evolution,” Schweitzer says. “There is almost no information about population-level evolutionary responses to these disturbance events. With increasing disturbance around the globe, understanding the long-term evolutionary consequences of fire on plants is critical.”

Understanding what happens to plant communities after a fire event is exactly what Mona Papeş is out to discover. Will the native plants be more successful or will there be more invasive plants in the burnt areas? It is a matter of adaptation and dispersal.

“The fires burned different areas with different intensity,” says Papeş, assistant professor in EEB. “The basic goal is to understand how fire affects plant communities in terms of number and abundance of species.”

In areas of high-intensity burns, the forest canopy changed from completely closed to completely open. This affects the amount of sunlight that reaches the forest floor, which in turn, affects the types of plant communities sprouting up after the fires. Papeş and her team are assessing and comparing the recovery of plant communities in the low-, mid-, and high-intensity areas to reference unburned sites, with the goal of documenting any shifts in the plant communities.

“We are interested in the number of plant species, as well as the abundance of species,” Papeş says. “This will allow us to forecast the trajectory of understory plant communities under different intensity fires in the future, which may or may not affect how we use fire as a forest management tool.”

The devastation of the fires still hangs in the air for many people who call the area around the Smokies home. If there is one lesson learned, it is that nature is resilient, and in the Park, it is making a comeback. Whether it will look the same in the future is still an unknown, but EEB researchers are rolling up their sleeves and digging in to find out.

Read more about post-fire research in the Smokies.

Filed Under: newsletter

Student News and Updates

November 6, 2017 by wpeeb

Graduate Student Spotlights

One of the most important metrics when measuring the success of a department is external funding. Usually, this means looking at how much grant money faculty receive, but our EEB students have an excellent record in winning prestigious grants and fellowships. In fact, 25 percent of our graduate students are self-funded. Last academic year, 14 of our 56 graduate students brought in a total of over $300,000 in funding. The following are just a few examples:

Three EEB students won three-year National Science Foundation (NSF) Graduate Research Fellowship Program awards:

  • Patrick McKenzie, finishing undergraduate in the Armsworth Lab
  • Rachel Swenie, new PhD student in the Matheny Lab
  • Morgan Roche, PhD student in the Kalisz Lab

Shelby Scott (Gross Lab) was awarded a three-year National Defense Science and Engineering Graduate (NDSEG) Fellowship.

EEB Students in the News

Below is a sampling of articles from our EEB blog. We hope you enjoy reading about our fantastic students!

  • BSA Research Award for Benoit
  • Science Writing Award for Bush
  • Evolution Grant for Benoit
  • Roche, Botanist in Action
  • Milt (PhD 2015) Research Featured in New Book
  • EEB’s Amazing Grad Students: Publications
  • Nature Ecology & Evolution paper for Van Nuland
  • Bush Authors Scientific American Blog Post
  • Scientific American Blog Highlights UT Research
  • Penley Fellowship for Bayliss
  • Shipley-Swann Fellowship for Pierson
  • Sigma Xi Award for Rivarola

Filed Under: newsletter

Noise Pollution and Songbirds

November 6, 2017 by wpeeb

Liz Derryberry

Derryberry (center, back) identifying songbirds during a workshop with middle-school students.

A songbird belting out its song – whether from the top of a tree in a forest or on a street corner downtown – is what motivates new Assistant Professor Elizabeth Derryberry’s research program.

“People always smile when I tell them my lab studies bird song and then immediately ask if I can identify this one bird that always wakes them up in the morning,” Derryberry says.

Apart from its general appeal to the public, bird song is a fascinating behavior with many parallels to human language.

“Many birds learn their song, just as children learn their words: from their parents,” Derryberry says. “A bird’s song has become an important model for how traits can change through mistakes and innovations made across generations – known as cultural evolution – not just genetic changes.”

Because cultural evolution can happen much more rapidly than genetic evolution, researchers use culturally evolving traits to measure rapid responses to environmental change. Derryberry does just that in her lab by examining how songs change in response to noise pollution, which is a global issue.

Over the past five years, she has studied the effects of noise pollution on song, using a common songbird that persists in the urban parks of San Francisco – the white-crowned sparrow. Her group finds that songs have increased in pitch and become narrower in their frequency range over the past 30 years. Birds hear these songs at greater distances in low-frequency urban noise. These changes come with a cost, however, as female sparrows prefer songs with a broader frequency range, most likely because such songs are more difficult to produce.

White-crowned sparrow male singing above the din in San Francisco

White-crowned sparrow male singing above the din in San Francisco

“One of the best parts of this project was that I had the opportunity to conduct an experiment to test whether cultural evolution really can explain these changes in song over time,” Derryberry says.

In her lab, she raised nearly 50 baby songbirds over two years in different noise environments and demonstrated that birds preferentially learned songs least masked by noise in their environment. Once they learned that song, however, they did not change it even when their noise environment changed.

“Let’s just say that feeding 50 baby birds every half hour dawn to dusk was good training for developing a work-life balance,” Derryberry says.

As her team worked in the field setting of urban San Francisco, heat waves were a serious issue. The fact that heat waves are increasing in frequency and magnitude across the globe has inspired a new line of research in Derryberry’s lab. Her team, along with former postdoc and collaborator Ray Danner at UNCW, is now studying how heat stress affects singing and mate choice behaviors in songbirds.

“Our initial findings are really exciting, and suggest both cognitive and motor impairment at temperatures experienced in current heat waves,” says Derryberry, who looks forward to pursuing these questions at UT as the research breadth and strength of the department promises many great collaborations.

Filed Under: newsletter

Researching Animal Behavior

November 6, 2017 by wpeeb

Hannah AndersonBy her senior year Hannah Anderson, an EEB major, had already been involved in several projects. She started in the Riechert Lab where she continues to maintain a large population of spiders under the guidance of graduate student Angela Chuang. Frequently left in charge of the lab in Angela’s absence, Hannah has been learning many of the more practical concerns required for maintaining a living population in a lab setting and the process of collecting living samples.

Hannah has also been involved in a project in the Simberloff Lab exploring the behavior of the native green anole and responses to the invasive brown anole. Though her time on this project was relatively brief, it provided invaluable knowledge regarding the study of animal behavior in a natural setting and the complications therein. The grant application process and protocol review by the Institutional Animal Care and Use Committee (IACUC) also gave Hannah additional experience.

Hannah did not stop there. In the fall of 2016, she took a Comparative Animal Behavior lab, where groups work together to create research projects. Though the class is over, Hannah has not let the project end. With the help of Professor Todd Freeberg, Hannah works directly with graduate student Johnathan “Alex” Grizzell and uses all of the experience she has gained up to this point to help design a field experiment exploring the behavioral responses of native birds to anthropogenic noise. During background research, Hannah noticed something odd in the scientific literature: though there had been many studies on the effects of anthropogenic noise on various organisms, most of them used modulated white noise as a replacement for anthropogenic noise. There were virtually no studies, except for one on frogs, that tested whether or not white noise was a suitable replacement for anthropogenic noise. Using a playback experiment, Hannah is attempting to prove that the two are not equivalent when it comes to Carolina chickadees and tufted titmice. Hannah intends to use her experience as a fully involved data gatherer and data coder for further research and to publish before she enters graduate school.

Filed Under: newsletter

Using Math to Measure Human Impact

November 6, 2017 by wpeeb

Orou GaoueA simple, but intriguing question led Orou Gaoue to embrace a career in academia: how do we know if a species will go extinct and when will it go extinct? Beyond this simple question, Gaoue’s research is motivated by the desire to understand how humans, through activities such as harvest, fire, and deforestation, affect the abundance and distribution of species and how species’ responses to such activities affect future human choices.

“I have always been interested in how one can use simple mathematics that we learn in high school and college to understand the ecological functioning of plant populations and measure to what extent human activities contribute to the extinction of species and what can we do about it,” says Orou Gaoue, a new assistant professor in EEB. “Studying how local people, in parts of the world where they rely the most on natural resources for their daily life, make decisions about how to use the nature they are surrounded with, and then measuring how such decisions affect the persistence of these resources is fascinating.”

Gaoue is no stranger to Knoxville. From 2011 to 2013, he was a postdoctoral fellow at NIMBioS before leaving Knoxville to join the faculty at the University of Hawaii at Manoa. Four years later, Gaoue is excited to return because of the opportunity to work with an exciting group of students and colleagues with a deep interest and extensive experience in conservation science.

“Since I have been back, people often ask me why someone would leave the warm and beautiful weather of Hawaii to come back to the Tennessee Valley,” Gaoue says. “I answer that the opportunity to be part of a developing cluster in conservation biology at EEB and to collaborate on new research projects to tackle some of the most pressing world conservation problems is too good to refuse.”

Filed Under: newsletter

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